Connectogram: A Graphical Representation of Connectomics

Lecture 9 min.



A connectogram is a graphical representation of connectomics , the field of knowledge concerned with mapping all the white matter connections in the human brain. It is usually a circular graph obtained by applying graph theory to diffusion MRI to demonstrate white matter connections.

Connectograms are graphical representations of connectomics , a field of research devoted to mapping and interpreting all the fiber connections of white matter in the human brain. These circular graphs, based on diffusion MRI data, use graph theory to demonstrate white matter connections and cortical characteristics for individual structures, individual subjects, or populations.

Structure

Connectogram: A Graphical Representation of Connectomics

A connectogram showing the averaged connections and cortical properties of 110 healthy, right-handed men aged 25 to 36 years

A connectogram of a healthy control subject, including 5 additional nodal measures not included in the standard connectogram. From the outside in, the rings represent cortical area, gray matter volume, surface area, cortical thickness, curvature, degree of connectivity, node strength, betweenness centrality, eccentricity, node efficiency, and eigenvector centrality. An empty ring was added between the degree of connectivity and node strength as a placeholder.

Description

The connectogram as a graphical representation of brain connectomics was first proposed in 2012 . A connectogram is usually a circular graph in which the left half shows the connections of the left hemisphere and the right half those of the right. In turn, the halves are divided into the frontal lobe , the insular lobe, the limbic lobe, the temporal lobe, subcortical structures, and the cerebellum. At the very bottom, between the two hemispheres, the brainstem is also shown. Within these lobes, each cortical region is labeled with its own abbreviation and assigned its own color. The colors are used to find regions in other images of brain surfaces and to assess their relative positions. Inside the ring of cortical regions, nested rings describe such quantities as the gray matter volume of the region, the area of the region, the cortical thickness of the region, the surface curvature of the region, and the degree of connectivity of the region (the relative proportion of the connections of this region to the connections of the whole brain), in order of nesting.

Connectogram: A Graphical Representation of Connectomics
Legend for the metadata presented in the various rings of the connectogram.

Background and description

The Connectogram , as a graphical representation of brain connectomics , was proposed in 2012

Circular representations of connections have been used in a number of disciplines; examples include representations of aspects of epidemics, geographic networks, musical rhythms, diversity of bird populations, and genomic data. Connectograms have also been mentioned as a source of inspiration for the style of Tony Stark's helmet heads-up display in " Iron Man 3" .

Connectogram: A Graphical Representation of Connectomics
Brains colored according to the outer ring of the connectogram.

Connectograms are circular, with the left half depicting the left hemisphere and the right half depicting the right hemisphere. The hemispheres are further subdivided into the frontal lobe , the insular cortex , the limbic lobe , the temporal lobe , the parietal lobe , the occipital lobe , subcortical structures, and the cerebellum.. At the bottom, between the two hemispheres, the brainstem is also depicted. Within these lobes, each cortical region is labeled with an abbreviation and assigned its own color, which can be used to denote the same cortical regions in other figures, such as the parcellated brain surfaces in the adjacent image, so that the reader can find the corresponding regions of the cerebral cortex on a geometrically accurate surface, and see how different the connected regions can be. Inside the ring of the cortical surface, concentric circles represent different attributes of the corresponding cortical regions. These metric rings, in order from the outermost to the innermost, represent gray matter volume , surface area., cortical thickness, curvature, and degree of connectivity (the relative share of fibers beginning or ending in a given region, compared with the whole brain). Inside these circles, lines connect regions that were found to be structurally connected. The relative density (number of fibers) of these connections is reflected in the opacity of the lines, so that different connections and their structural significance can be easily compared. The fractional anisotropy of each connection is reflected in its color.

Uses

Brain mapping

Given the recent concerted effort to map the entire human brain and its connections , it is becoming increasingly important to find ways to graphically represent the large amounts of data involved in connectomics . Most other representations of the connectome use 3 dimensions and therefore require an interactive graphical user interface. A connectogram can display 83 cortical regions in each hemisphere and visually show which regions are structurally connected, all on a flat surface. It is therefore convenient to store in patient charts or to display in print. The graphs were originally created using a visualization tool called Circos ,. [10] [11]

Clinical use

Connectogram: A Graphical Representation of Connectomics
A connectogram typical of clinical use, depicting the presumed connection damage in Phineas Gage , who in 1848 survived a large iron rod piercing his skull and brain. The connectogram shows only those connections that are presumed to have been damaged.

At the individual level, connectograms can be used to inform the treatment of patients with neuroanatomical abnormalities. Connectograms have been used to monitor the progress of neurological recovery in patients who have suffered traumatic brain injury (TBI). [12] They have also been applied to the famous patient Phineas Gage to assess the damage to his neural network (as well as damage at the cortical level, which was the main focus of earlier studies of Gage). [13]

Empirical research

Connectograms can represent average cortical measures (gray matter volume, surface area, cortical thickness, curvature, and degree of connectivity), as well as tractography data such as the average density and fractional anisotropy of connections, in populations of any size. . This allows visual and statistical comparison between groups, such as men and women [14], cohorts of different ages, or healthy control individuals and patients. Some versions have been used to analyze how networks are divided in patient populations [15], or to analyze the relative balance between inter- and intrahemispheric connections. [16]

Modified versions

There are many possibilities for which measures are included in the rings of the connectogram. Irimia and Van Horn (2012) published connectograms that explore correlational relationships between regions and use figures to compare graph theory and connectomics approaches. [17] Some have been published without the inner cortical metrics. [18] Others include additional measures related to neural networks , [19] which can be added as extra rings toward the inside to show graph theory metrics, as in the extended connectogram here:

Regions and their abbreviations

Acronym Region in the connectogram
ACgG / S Anterior part of the cingulate gyrus and sulcus
ACIRINS Anterior segment of the circular sulcus of the insula
ALSHorp Horizontal ramus of the anterior segment of the lateral sulcus (or fissure)
ALSVerp Vertical ramus of the anterior segment of the lateral sulcus (or fissure)
AngG Angular gyrus
AOcS Anterior occipital sulcus and preoccipital notch (temporo-occipital incisure)
ATrCoS Anterior transverse collateral sulcus
CcS Calcarine sulcus
CgSMarp Marginal ramus (or part) of the cingulate sulcus
CoS / LinS Medial occipito-temporal sulcus (collateral sulcus) and lingual sulcus
CS Central sulcus (fissure of Rolando)
Cun Cuneus
FMarG / S Fronto-marginal gyrus (of Wernicke) and sulcus
FuG Lateral occipito-temporal gyrus ( fusiform gyrus )
HG Heschl's gyrus (anterior transverse temporal gyrus)
InfCirInS Inferior segment of the circular sulcus of the insula
InfFGOpp Opercular part of the inferior frontal gyrus
InfFGOrp Orbital part of the inferior frontal gyrus
InfFGTrip Triangular part of the inferior frontal gyrus
InfFS Inferior frontal sulcus
InfOcG / S Inferior occipital gyrus and sulcus
InfPrCS Inferior part of the precentral sulcus
IntPS / TrPS Intraparietal sulcus (interparietal sulcus) and transverse parietal sulci
InfTG Inferior temporal gyrus
InfTS Inferior temporal sulcus
JS Sulcus intermedius primus (of Jensen)
LinG Lingual gyrus, lingual part of the medial occipito-temporal gyrus
LOcTS Lateral occipito-temporal sulcus
LoInG/CInS Long insular gyrus and central insular sulcus
LOrS Lateral orbital sulcus
MACgG / S Middle-anterior part of the cingulate gyrus and sulcus
MedOrS Medial orbital sulcus (olfactory sulcus)
MFG Middle frontal gyrus
MFS Middle frontal sulcus
MOcG Middle occipital gyrus, lateral occipital gyrus
MOcS / LuS Middle occipital sulcus and lunate sulcus
MPosCgG / S Middle-posterior part of the cingulate gyrus and sulcus
MTG Middle temporal gyrus
OcPo Occipital pole
OrG Orbital gyri
OrS Orbital sulci (H-shaped sulci)
PaCL / S Paracentral lobule and sulcus
PaHipG Parahippocampal gyrus , parahippocampal part of the medial occipito-temporal gyrus
PerCaS Pericallosal sulcus (S of the corpus callosum)
POcS Parieto-occipital sulcus (or fissure)
PoPl Polar plane of the superior temporal gyrus
PosCG Postcentral gyrus
PosCS Postcentral sulcus
PosDCgG Posterior-dorsal part of the cingulate gyrus
PosLS Posterior ramus (or segment) of the lateral sulcus (or fissure)
PosTrCoS Posterior transverse collateral sulcus
PosVCgG Posterior-ventral part of the cingulate gyrus (isthmus of the cingulate gyrus)
PrCG Precentral gyrus
PrCun Precuneus
RG Straight gyrus (gyrus rectus)
SbCaG Subcallosal area , subcallosal gyrus
SbCG / S Subcentral gyrus (central operculum) and sulci
SbOrS Suborbital sulcus (rostral sulcus, supraorbital sulcus)
SbPS Subparietal sulcus
ShoInG Short insular gyri
SuMarG Supramarginal gyrus
SupCirInS Superior segment of the circular sulcus of the insula
SupFG Superior frontal gyrus
SupFS Superior frontal sulcus
SupOcG Superior occipital gyrus
SupPrCS Superior part of the precentral sulcus
SupOcS/TrOcS Superior occipital sulcus and transverse occipital sulcus
SupPL Superior parietal lobule
SupTGLp Lateral aspect of the superior temporal gyrus
SupTS Superior temporal sulcus
TPl Temporal plane of the superior temporal gyrus
TPo Temporal pole
TrFPoG / S Transverse frontopolar gyri and sulci
TrTS Transverse temporal sulcus
Amg Amygdala
CaN Caudate nucleus
Hip Hippocampus
NAcc Nucleus accumbens
Pal Pallidum
Pu Putamen
Tha Thalamus
CeB Cerebellum
BStem Brainstem

See also

  • Connectome
  • Connectomics
  • Human Connectome Project
  • Brain mapping
  • Tractography
  • Chord diagram

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Terms: Biological modeling of artificial intelligence